Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015950646.1_cds_XP_016491014.1_81378
CDS Infomation

[gene=LOC107810717] [db_xref=GeneID:107810717] [protein=scarecrow-like protein 22] [protein_id=XP_016491014.1] [location=1180..3447] [gbkey=CDS]
Sequence

ATGAAGGGGATGCCCTTACCCTTTGATTTTGAGGGGAAGGGGGTGTTAGACTTAGACGTT
GTGTTAAATAAAAATAGCATCTTGAATTCTTGGAACTACAATAGCAAAGAAAGTTGTTAT
CTTGTAAATAGTCCAAGTGCTGTACTGGATATCATAAGGAGTCCAAGGCCTGTTACTTCT
TCTTCAACCCTGTCTTCATCTTTGGGTGGTGGTGGTGGTGGTGGAGGTGGCACTGCTTCC
ACAGATACGGCAGGTGCAGTTTCTGCAAACCCATCTTCTAAATGGCAGCAGCAGCAGCAA
CAACAAGACAACACCACTGCCACCAGTTCCAATGTAGGAGGAGCTGCTGCTGAATCTGAG
TTTCAACAAGTTGCTGCTGCTTCTGCTGCTGCTACAGAAGGGAAGAAATGTGCTATGGAG
GAGTGGGAAGGTGGGTTATCAGAGTCTGTAATGGCTTCTCCTTGTCAAGAACAGTCTATA
CTTGGGTGGATAATGGGTGATGTAGATGACCCCTCCATGTCTAACTTGAACAAGGTGTTG
CAGGTTAGTGGCCCTATGGACTATGAATTCAATGCAGGATTTGGGGTTGTGGATCAAGGT
TTTGGTGTTGACCAAATTGGTACTAGTAGTTTCATGCCTGCAATTAACAACTCTTCCGTT
TCAAGTTTTCCTCCTACTTCTACAAGGATGAACAATGACAAGATTGGCTTGTTTTCTAAC
ATACCAACAAATCTCTCTCAAAATCCAATCTTTCCTTCATTCTCTAACAATCTTGGCCCA
GTTTCCTTCAGCCAGACACAACAGCAGCCATTTGAGAGCACAGATTTAAAGCCTCAGAGT
TTCCATTCACATTTCTTGATTAACCAGCACCAAACACAGATTCCTCAGAACCCATCATTT
CTTTTGCCATTGCCATTTGCACAGCAGGAGCAAAATCTTGTCTTGCCACCAAAGGCAAAA
AGGCACAACCCCGGGACCCTTGAACAACAGGGCTCTCAGATCTCCCAAGAACTGTTTATA
GATGCAGGACAACAGCAGCCAACACCATCCCATCAGCTCCAGCTGCTTCCCCATTTTAGG
CCAGGAGTACCAATAGGAACAAAGCCAAAGATGGTGGGGGAAGAAATGGGGCAGTTTCAT
CAACTACAACTACAGCAGCAACAACAACAAGCAATTATTGACCAGCTATTCAAAGCTGCA
GAGCTGGTCCAGACAGGGAATCCAGTACTCGCGCAAGGGATATTGGCGCGGCTCAATCAC
CAGCTCTCTCCAATTGGTAAGCCTTTCTATAGGGCTGCTTTTTATTGCAAGGAGGCTTTA
CAATTGCTACTTCATACCAACACCAACAACTTGAACAACCCCTCTATACCATCTTCTTCA
CCTTTTAATCTCATCTTCAAGATTGGTGCCTATAAGTCCTTCTCTGAGATCTCACCAGTT
GCACAGTTTGCTAATTTCACTTGTAACCAAGCCCTGCTTGAGGTCTTGGATGGGTTTGAA
AGAATTCATATTGTTGATTTTGATATCGGCTATGGCAGGCAATGGGCTTCTCTTATGCAA
GAGCTTGCCTTGAGAAGTGGTGGCGCACCTACCCTGAAAATAACTGCATTGGCCTCACCC
TCCACACATGACCAACTAGAGCTTGGACTCACTAGAGAAAGTTTGATCCATTTTGCTAAC
GAAATTAACATGGAATTTGAGTTTGAGATTTTAAGCATTGATTCTTTGAATTCAACGTCG
TGGTCACTGCCTCCTCTAGTCTCAGAGAATGAGGCAATTGCTGTCAATCTTCCTATTAGC
TCGCTTGCGAGCTATCAGCTGTCGCTCCCATTGGTTCTTCGTTTCGTGAAGCAGCTGTCA
CCTAGGATTGTGGTTTCTGTGGACAAAGGTTGTGACCGGACTGATCTACCATTTCCAAAC
CATGTAATTCAAATCCTTCAGTCGTACTCAAACCTTCTTGAGTCGTTAGATGCCGTAAAT
GTGAACTTTGATGCCCTTCAAAAGATTGAAAGATTCTTGCTCCAACCAAGAATTGAGAGA
ATTGTAATGAGTCGATTTCGTTCCCCTGAAAAGACGCAGCATTGGAGGGCACTGTTTTTG
TCATCTGGACTCTCCCCGTTACCTTTCAGCAATTTTACAGAATCACAGGCAGAGTGTGTG
GTGAAGAGAACTCCTGTTCGGGGTTTCCATGTAGAGAAGAGGCAGTCTTCGCTTGTTCTC
TGCTGGCAGCGAAAGGAGCTCATCTCAGCTTCAGCTTGGAGGTGCTGA

Peptide Sequence

PEP ID

XP_016491014.1
PEP Infomation

PREDICTED: scarecrow-like protein 22 [Nicotiana tabacum]
Sequence

MKGMPLPFDFEGKGVLDLDVVLNKNSILNSWNYNSKESCYLVNSPSAVLDIIRSPRPVTS
SSTLSSSLGGGGGGGGGTASTDTAGAVSANPSSKWQQQQQQQDNTTATSSNVGGAAAESE
FQQVAAASAAATEGKKCAMEEWEGGLSESVMASPCQEQSILGWIMGDVDDPSMSNLNKVL
QVSGPMDYEFNAGFGVVDQGFGVDQIGTSSFMPAINNSSVSSFPPTSTRMNNDKIGLFSN
IPTNLSQNPIFPSFSNNLGPVSFSQTQQQPFESTDLKPQSFHSHFLINQHQTQIPQNPSF
LLPLPFAQQEQNLVLPPKAKRHNPGTLEQQGSQISQELFIDAGQQQPTPSHQLQLLPHFR
PGVPIGTKPKMVGEEMGQFHQLQLQQQQQQAIIDQLFKAAELVQTGNPVLAQGILARLNH
QLSPIGKPFYRAAFYCKEALQLLLHTNTNNLNNPSIPSSSPFNLIFKIGAYKSFSEISPV
AQFANFTCNQALLEVLDGFERIHIVDFDIGYGRQWASLMQELALRSGGAPTLKITALASP
STHDQLELGLTRESLIHFANEINMEFEFEILSIDSLNSTSWSLPPLVSENEAIAVNLPIS
SLASYQLSLPLVLRFVKQLSPRIVVSVDKGCDRTDLPFPNHVIQILQSYSNLLESLDAVN
VNFDALQKIERFLLQPRIERIVMSRFRSPEKTQHWRALFLSSGLSPLPFSNFTESQAECV
VKRTPVRGFHVEKRQSSLVLCWQRKELISASAWRC

Transcript Sequence

Gene sequence data has not been registered.